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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
73
ChIP-seq
Assay category
73
DNA binding
Target of assay
47
transcription factor
26
histone
26
histone modification
14
broad histone mark
12
narrow histone mark
7
RNA binding protein
5
chromatin remodeller
1
other context
1
other post-translational modification
Date released
60
November, 2017
13
August, 2017
Available data
1265
bigWig
1222
bed narrowPeak
1167
bam
760
bigBed narrowPeak
628
fastq
325
tagAlign
108
bed broadPeak
73
bigBed broadPeak
41
bed bed3+
3
tar
1
tagAlign bed3+
Organism
73
Homo sapiens
Biosample type
58
cell line
15
primary cell
Organ
58
liver
6
brain
epithelium
6
vasculature
4
blood vessel
2
vein
Project
73
AMP
Genome assembly (visualization)
73
hg19
58
GRCh38
Lab
73
AMP-T2D consortium
Audit category:
13
inconsistent control read length
1
inconsistent assembly
month_released!
September, 2020
organ_slims!
epithelium
BIOSAMPLE
ASSAY
73 results
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ChIP-seq
cell line
HepG2
58
primary cell
skeletal muscle myoblast
13
astrocyte of the cerebellum
2
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