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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
ChIP-seq
Assay category
15
DNA binding
Target of assay
49
transcription factor
30
histone
30
histone modification
16
broad histone mark
14
narrow histone mark
9
RNA binding protein
5
chromatin remodeller
1
other context
1
other post-translational modification
Date released
10
November, 2017
5
August, 2017
Available data
445
bigWig
434
bed narrowPeak
410
bam
174
tagAlign
154
bigBed narrowPeak
115
fastq
30
bed broadPeak
15
bigBed broadPeak
13
bed bed3+
1
tagAlign bed3+
Organism
15
Homo sapiens
Biosample type
8
primary cell
7
cell line
Organ
7
liver
3
brain
2
epithelium
2
vasculature
1
blood vessel
Project
15
AMP
Genome assembly (visualization)
15
hg19
14
GRCh38
Lab
15
AMP-T2D consortium
Audit category:
5
inconsistent control read length
organ_slims!
ovary
BIOSAMPLE
ASSAY
15 results
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ChIP-seq
primary cell
skeletal muscle myoblast
5
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
cell line
HepG2
7
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