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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
DNase-seq
4
ChIP-seq
Assay category
18
DNA accessibility
4
DNA binding
Target of assay
3
histone
3
histone modification
2
broad histone mark
1
RNA binding protein
1
narrow histone mark
1
transcription factor
Date released
11
June, 2019
6
October, 2019
2
November, 2017
1
August, 2017
1
November, 2018
1
November, 2020
Available data
773
bam
720
bigWig
547
tsv
204
bed narrowPeak
107
bigBed narrowPeak
104
fastq
38
bed bed3+
28
tagAlign
23
bed broadPeak
22
bigBed broadPeak
6
bed bed3
4
bed bedMethyl
4
bed bedgraph
4
bigBed bedMethyl
3
bedpe bed3+
3
hdf5
3
hic
1
tar
Organism
22
Homo sapiens
Biosample type
14
primary cell
7
tissue
1
in vitro differentiated cells
Organ
78
kidney
63
liver
38
brain
36
limb
33
musculature of body
30
heart
22
epithelium
18
ureter
17
vasculature
13
blood vessel
9
connective tissue
7
pancreas
4
artery
4
eye
4
vein
2
adipose tissue
2
nerve
1
spleen
0
lung
Project
22
AMP
Genome assembly (visualization)
20
GRCh38
20
hg19
Lab
22
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
22 results
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DNase-seq
ChIP-seq
primary cell
endothelial cell of umbilical vein
2
2
brain microvascular endothelial cell
1
2
cardiac fibroblast
3
brain pericyte
1
hepatic stellate cell
1
+ See 2 more…
tissue
coronary artery
2
omental fat pad
2
tibial artery
2
ascending aorta
1
in vitro differentiated cells
adipocyte
1
See all biosamples
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