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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 32DNase-seq
  • 6ChIP-seq
Assay category
  • 32DNA accessibility
  • 6DNA binding
Target of assay
  • 3RNA binding protein
  • 3histone
  • 3histone modification
  • 3narrow histone mark
  • 3transcription factor
Date released
  • 30June, 2019
  • 6November, 2017
  • 2November, 2018
Available data
  • 243bam
  • 222bigWig
  • 203bed narrowPeak
  • 127bigBed narrowPeak
  • 118tagAlign
  • 47bed broadPeak
  • 38bigBed broadPeak
  • 35bed bed3+
  • 26tsv
  • 21fastq
  • 3hdf5
  • 2bed bedMethyl
  • 2bigBed bedMethyl
  • 1bed bed3
  • 1tagAlign bed3+
Organism
  • 38Homo sapiens
Biosample type
  • 27tissue
  • 11primary cell
Organ
  • 78kidney
  • 63liver
  • 38brain
  • 36limb
  • 33musculature of body
  • 30heart
  • 22epithelium
  • 18ureter
  • 17vasculature
  • 13blood vessel
  • 9connective tissue
  • 7pancreas
  • 4artery
  • 4eye
  • 4vein
  • 2adipose tissue
  • 2nerve
  • 1spleen
Project
  • 38AMP
Genome assembly (visualization)
  • 38GRCh38
  • 28hg19
Lab
  • 38AMP-T2D consortium
BIOSAMPLE
ASSAY

38 results

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DNase-seq
ChIP-seq
tissue
brain14
frontal cortex2
Ammon's horn1
caudate nucleus1
cerebellar cortex1
primary cell
astrocyte of the cerebellum12
brain microvascular endothelial cell12
choroid plexus epithelial cell12
astrocyte of the hippocampus1
brain pericyte1
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