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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
DNase-seq
2
ChIP-seq
Assay category
6
DNA accessibility
2
DNA binding
Target of assay
histone
4
histone modification
2
RNA binding protein
2
broad histone mark
2
narrow histone mark
2
transcription factor
Date released
4
June, 2019
2
November, 2017
2
October, 2019
Available data
206
fastq
200
bam
190
bigWig
147
tsv
80
zippedFastqFolder
50
bed narrowPeak
34
bigBed narrowPeak
8
bed bed3+
8
bed broadPeak
8
bigBed broadPeak
6
hic
5
bedpe bed3+
3
bed bedMethyl
3
bigBed bedMethyl
3
cool
3
tagAlign
2
hdf5
1
tar
Organism
8
Homo sapiens
Biosample type
8
primary cell
Organ
kidney
49
liver
36
limb
35
brain
33
musculature of body
heart
18
epithelium
18
ureter
13
vasculature
10
blood vessel
9
connective tissue
7
pancreas
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
8
AMP
Genome assembly (visualization)
8
GRCh38
8
hg19
Lab
8
AMP-T2D consortium
organ_slims!
heart
kidney
target.investigated_as!
histone
BIOSAMPLE
ASSAY
8 results
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DNase-seq
ChIP-seq
primary cell
brain microvascular endothelial cell
1
1
choroid plexus epithelial cell
1
1
endothelial cell of umbilical vein
2
hepatocyte
1
retinal pigment epithelial cell
1
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