Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 186DNase-seq
Assay category
  • 186DNA accessibility
Date released
  • 171June, 2019
  • 9November, 2018
  • 5October, 2019
  • 1November, 2020
Available data
  • 2716bam
  • 2558bigWig
  • 1531tsv
  • 1262bed narrowPeak
  • 857fastq
  • 553bigBed narrowPeak
  • 372tagAlign
  • 234bed bed3+
  • 223bed broadPeak
  • 186bigBed broadPeak
  • 158txt
  • 153zippedFastqFolder
  • 64xls
  • 19hic
  • 17bedpe bed3+
  • 16bed bedMethyl
  • 16bigBed bedMethyl
  • 11bed bed3
  • 8csv
  • 3cool
  • 1bedpe
  • 1tagAlign bed3+
  • 1vcf
Organism
  • 186Homo sapiens
Biosample type
  • 175tissue
  • 11primary cell
Organ
  • 72kidney
  • 36limb
  • 33musculature of body
  • 28heart
  • 27brain
  • 18ureter
  • 7blood vessel
  • 7vasculature
  • 6connective tissue
  • 6epithelium
  • 6pancreas
  • 5liver
  • 4artery
  • 3eye
  • 2adipose tissue
  • 2nerve
  • 1spleen
  • 1vein
Project
  • 186AMP
Genome assembly (visualization)
  • 186GRCh38
  • 166hg19
Lab
  • 186AMP-T2D consortium
Audit category:
  • 1inconsistent ontology term
replication_type!
  • isogenic
BIOSAMPLE
ASSAY

186 results

search-icontable-tab-icon
Clear Filters
DNase-seq
tissue
heart18
muscle of arm17
brain14
kidney13
muscle of leg13
primary cell
kidney tubule cell2
brain pericyte1
cardiac fibroblast1
endothelial cell of umbilical vein1
hepatic stellate cell1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego