Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 14ChIP-seq
Assay category
  • 14DNA binding
Target of assay
  • 49transcription factor
  • 30histone
  • 30histone modification
  • 16broad histone mark
  • 14narrow histone mark
  • 9RNA binding protein
  • 5chromatin remodeller
  • 1other context
  • 1other post-translational modification
Date released
  • 9November, 2017
  • 5August, 2017
Available data
  • 440bigWig
  • 429bed narrowPeak
  • 405bam
  • 174tagAlign
  • 149bigBed narrowPeak
  • 110fastq
  • 29bed broadPeak
  • 14bigBed broadPeak
  • 13bed bed3+
  • 1tagAlign bed3+
Organism
  • 14Homo sapiens
Biosample type
  • 8primary cell
  • 6cell line
Organ
  • 6liver
  • 3brain
  • 2epithelium
  • 2vasculature
  • 1blood vessel
Project
  • 14AMP
Genome assembly (visualization)
  • 14hg19
  • 13GRCh38
Lab
  • 14AMP-T2D consortium
Audit category:
  • 5inconsistent control read length
BIOSAMPLE
ASSAY

14 results

search-icontable-tab-icon
Clear Filters
ChIP-seq
primary cell
skeletal muscle myoblast5
astrocyte of the cerebellum1
brain microvascular endothelial cell1
choroid plexus epithelial cell1
cell line
HepG26
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego