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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
94
ChIP-seq
1
FAIRE-seq
Assay category
94
DNA binding
1
DNA accessibility
Target of assay
91
histone
91
histone modification
58
broad histone mark
33
narrow histone mark
3
RNA binding protein
3
transcription factor
Date released
63
November, 2017
25
May, 2019
6
October, 2017
1
July, 2019
Available data
243
bam
222
bigWig
203
bed narrowPeak
127
bigBed narrowPeak
118
tagAlign
47
bed broadPeak
38
bigBed broadPeak
bed bed3+
26
tsv
21
fastq
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
tagAlign bed3+
Organism
95
Homo sapiens
Biosample type
89
tissue
6
primary cell
Organ
353
liver
95
brain
84
pancreas
72
vasculature
70
blood vessel
64
heart
60
epithelium
54
blood
54
bodily fluid
48
limb
26
kidney
24
nerve
21
artery
20
connective tissue
14
musculature of body
12
spleen
11
vein
8
adipose tissue
2
eye
Project
95
AMP
Genome assembly (visualization)
94
GRCh38
43
hg19
Lab
95
AMP-T2D consortium
Audit category:
3
missing controlled_by
files.file_type!
bed bed3+
tagAlign bed3+
organ_slims!
gonad
BIOSAMPLE
ASSAY
95 results
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ChIP-seq
FAIRE-seq
tissue
layer of hippocampus
16
temporal lobe
13
angular gyrus
12
caudate nucleus
12
middle frontal area 46
11
+ See 5 more…
primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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