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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
299
ChIP-seq
Assay category
299
DNA binding
Target of assay
226
transcription factor
70
histone
70
histone modification
66
recombinant protein
46
broad histone mark
32
RNA binding protein
24
narrow histone mark
14
chromatin remodeller
1
other context
1
other post-translational modification
Date released
249
November, 2017
97
May, 2019
64
April, 2019
64
November, 2018
63
October, 2019
50
December, 2017
45
October, 2018
30
December, 2018
23
June, 2019
21
August, 2017
21
January, 2019
14
September, 2018
5
September, 2017
3
October, 2017
2
July, 2019
Available data
486
bam
418
fastq
406
bigWig
385
bed narrowPeak
362
bigBed narrowPeak
78
tagAlign
bed broadPeak
64
bigBed broadPeak
15
bed bed3+
3
tar
Organism
299
Homo sapiens
Biosample type
197
cell line
88
tissue
14
in vitro differentiated cells
Organ
247
liver
52
brain
14
epithelium
Project
299
AMP
Genome assembly (visualization)
275
GRCh38
245
hg19
Lab
299
AMP-T2D consortium
Audit category:
27
inconsistent control
Audit category:
10
missing controlled_by
Audit category:
8
inconsistent control read length
4
inconsistent control run_type
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
299 results
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Clear Filters
ChIP-seq
cell line
HepG2
197
tissue
liver
29
layer of hippocampus
16
caudate nucleus
11
substantia nigra
10
middle frontal area 46
9
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in vitro differentiated cells
hepatocyte
14
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