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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
80
ChIP-seq
1
FAIRE-seq
Assay category
80
DNA binding
1
DNA accessibility
Target of assay
80
histone
80
histone modification
54
broad histone mark
26
narrow histone mark
Date released
52
November, 2017
25
May, 2019
3
October, 2017
1
July, 2019
Available data
240
bam
219
bigWig
200
bed narrowPeak
124
bigBed narrowPeak
118
tagAlign
bed broadPeak
35
bed bed3+
35
bigBed broadPeak
26
tsv
18
fastq
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
1
tagAlign bed3+
Organism
81
Homo sapiens
Biosample type
81
tissue
Organ
250
liver
81
brain
72
pancreas
65
blood vessel
65
vasculature
58
heart
51
epithelium
48
limb
44
blood
44
bodily fluid
24
kidney
24
nerve
20
artery
14
musculature of body
13
connective tissue
12
spleen
11
vein
3
adipose tissue
1
eye
Project
81
AMP
Genome assembly (visualization)
80
GRCh38
29
hg19
Lab
81
AMP-T2D consortium
Audit category:
1
missing controlled_by
files.file_type!
bed broadPeak
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
81 results
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ChIP-seq
FAIRE-seq
tissue
layer of hippocampus
16
temporal lobe
13
angular gyrus
12
caudate nucleus
11
substantia nigra
10
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