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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
48
ChIP-seq
5
DNase-seq
3
ATAC-seq
Assay category
48
DNA binding
8
DNA accessibility
Target of assay
48
histone
48
histone modification
33
broad histone mark
15
narrow histone mark
Date released
308
November, 2017
192
June, 2019
93
May, 2019
73
November, 2018
64
April, 2019
56
October, 2019
45
October, 2018
39
August, 2017
36
December, 2017
30
December, 2018
21
January, 2019
6
October, 2017
2
July, 2019
1
November, 2020
Available data
218
bam
182
bigWig
168
bed narrowPeak
56
bigBed narrowPeak
49
tagAlign
13
tsv
6
bed bed3+
5
bed broadPeak
5
bigBed broadPeak
3
bedpe bed3+
3
hic
1
hdf5
tagAlign bed3+
Organism
56
Homo sapiens
Biosample type
47
tissue
7
cell line
2
in vitro differentiated cells
Organ
46
limb
33
blood vessel
33
vasculature
26
nerve
20
artery
epithelium
13
vein
7
pancreas
3
connective tissue
1
adipose tissue
1
kidney
Project
56
AMP
Genome assembly (visualization)
56
hg19
53
GRCh38
Lab
56
AMP-T2D consortium
files.file_type!
tagAlign bed3+
organ_slims!
epithelium
BIOSAMPLE
ASSAY
56 results
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ChIP-seq
DNase-seq
ATAC-seq
tissue
tibial nerve
24
2
tibial artery
18
2
adipose tissue
1
cell line
Panc1
6
1
in vitro differentiated cells
adipocyte
2
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