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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
61
ChIP-seq
28
DNase-seq
Assay category
61
DNA binding
28
DNA accessibility
Target of assay
54
histone
54
histone modification
34
broad histone mark
20
narrow histone mark
7
transcription factor
5
RNA binding protein
Date released
46
April, 2019
31
June, 2019
12
May, 2019
Available data
160
bigWig
138
bed narrowPeak
135
bam
113
tsv
89
bigBed narrowPeak
28
bed bed3+
28
bed broadPeak
28
bigBed broadPeak
8
bed bedMethyl
8
bigBed bedMethyl
3
bedpe bed3+
3
hic
Organism
89
Homo sapiens
Biosample type
83
tissue
6
primary cell
Organ
308
liver
127
brain
104
kidney
94
heart
91
pancreas
84
limb
83
vasculature
blood vessel
62
epithelium
54
blood
54
bodily fluid
47
musculature of body
28
connective tissue
26
nerve
25
artery
18
ureter
13
spleen
13
vein
10
adipose tissue
6
eye
Project
89
AMP
Genome assembly (visualization)
89
GRCh38
86
hg19
Lab
89
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
files.file_type!
xls
month_released!
December, 2017
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
89 results
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ChIP-seq
DNase-seq
tissue
heart left ventricle
28
3
heart
7
18
heart right ventricle
11
1
right atrium auricular region
7
2
right cardiac atrium
5
+ See 1 more…
primary cell
cardiac fibroblast
3
3
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