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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
38
ChIP-seq
26
total RNA-seq
22
ATAC-seq
Assay category
38
DNA binding
26
Transcription
22
DNA accessibility
Target of assay
38
histone
38
histone modification
22
broad histone mark
16
narrow histone mark
Date released
551
February, 2021
November, 2017
303
May, 2021
272
August, 2017
260
May, 2020
210
June, 2019
207
October, 2019
164
July, 2018
97
May, 2019
85
July, 2019
80
November, 2018
72
December, 2017
72
September, 2018
65
April, 2019
49
April, 2018
47
August, 2021
47
October, 2018
40
May, 2024
31
February, 2018
31
November, 2019
30
December, 2018
26
January, 2019
20
March, 2020
20
May, 2022
14
October, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
November, 2020
5
September, 2017
3
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
Available data
90
fastq
87
bam
86
bigWig
58
bed narrowPeak
26
tsv
20
bigBed narrowPeak
14
tagAlign
4
bed broadPeak
1
csv
Organism
86
Homo sapiens
Biosample type
72
primary cell
14
tissue
Organ
77
pancreas
61
epithelium
7
brain
1
adipose tissue
1
connective tissue
1
spleen
Project
86
AMP
Genome assembly (visualization)
86
GRCh38
85
hg19
Lab
85
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
35
missing controlled_by
month_released!
November, 2017
BIOSAMPLE
ASSAY
86 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
primary cell
pancreatic ductal cell
13
4
4
pancreatic beta cell
10
4
pancreatic acinar cell
8
2
3
pancreatic alpha cell
10
3
pancreatic endocrine cell
11
tissue
brain
6
body of pancreas
4
cerebellum (Hemisphere)
1
islet of Langerhans
1
omental fat pad
1
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