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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
64
ChIP-seq
9
DNase-seq
1
FAIRE-seq
Assay category
64
DNA binding
10
DNA accessibility
Target of assay
64
histone
64
histone modification
41
broad histone mark
23
narrow histone mark
RNA binding protein
4
transcription factor
Date released
34
May, 2019
33
October, 2019
5
June, 2019
2
November, 2017
Available data
105
bam
87
bigWig
76
bed narrowPeak
74
bigBed narrowPeak
13
bed broadPeak
13
bigBed broadPeak
13
tsv
11
bed bed3+
4
fastq
3
hic
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hdf5
1
tar
0
cool
Organism
74
Homo sapiens
Biosample type
55
tissue
19
primary cell
Organ
303
liver
124
brain
102
kidney
heart
88
pancreas
84
limb
78
vasculature
75
blood vessel
72
epithelium
47
musculature of body
44
blood
44
bodily fluid
26
nerve
24
artery
22
connective tissue
18
ureter
13
spleen
13
vein
5
adipose tissue
5
eye
Project
74
AMP
Genome assembly (visualization)
73
GRCh38
73
hg19
Lab
74
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
heart
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
74 results
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ChIP-seq
DNase-seq
FAIRE-seq
tissue
tibial artery
18
2
ascending aorta
12
1
aorta
11
thoracic aorta
11
primary cell
endothelial cell of umbilical vein
10
2
1
brain microvascular endothelial cell
1
1
choroid plexus epithelial cell
1
1
kidney capillary endothelial cell
1
smooth muscle cell of the brain vasculature
1
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