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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
65
ChIP-seq
9
DNase-seq
1
FAIRE-seq
Assay category
65
DNA binding
10
DNA accessibility
Target of assay
65
histone
65
histone modification
41
broad histone mark
24
narrow histone mark
RNA binding protein
4
transcription factor
Date released
36
May, 2019
33
October, 2019
5
June, 2019
1
November, 2017
Available data
176
bam
146
bigWig
125
bed narrowPeak
75
bigBed narrowPeak
68
tsv
12
bed broadPeak
12
bigBed broadPeak
11
bed bed3+
6
tagAlign
3
hic
2
bedpe bed3+
2
fastq
2
hdf5
bed bedMethyl
1
bigBed bedMethyl
1
tar
0
tagAlign bed3+
Organism
75
Homo sapiens
Biosample type
59
tissue
16
primary cell
Organ
303
liver
125
brain
102
kidney
88
heart
85
pancreas
84
limb
78
vasculature
75
blood vessel
69
epithelium
47
musculature of body
44
blood
44
bodily fluid
26
nerve
24
artery
22
connective tissue
18
ureter
13
spleen
13
vein
5
adipose tissue
5
eye
Project
75
AMP
Genome assembly (visualization)
74
GRCh38
74
hg19
Lab
75
AMP-T2D consortium
files.file_type!
bed bedMethyl
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
75 results
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Clear Filters
ChIP-seq
DNase-seq
FAIRE-seq
tissue
tibial artery
18
2
ascending aorta
12
1
aorta
11
thoracic aorta
11
coronary artery
2
2
primary cell
endothelial cell of umbilical vein
10
2
1
brain microvascular endothelial cell
1
1
kidney capillary endothelial cell
1
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