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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 51ChIP-seq
  • 1DNase-seq
Assay category
  • 51DNA binding
  • 1DNA accessibility
Target of assay
  • 44transcription factor
  • 8RNA binding protein
  • 7histone
  • 7histone modification
  • 5narrow histone mark
  • 2broad histone mark
  • 1chromatin remodeller
  • 1other context
  • 1other post-translational modification
Date released
  • 48November, 2017
  • 3August, 2017
  • 1October, 2018
Available data
  • 106bam
  • 106fastq
  • 101bigWig
  • 91bed narrowPeak
  • 52bigBed narrowPeak
  • 12bed bed3+
  • 9bed broadPeak
  • 8bigBed broadPeak
  • 3tar
  • 1tagAlign
Organism
  • 51Homo sapiens
Biosample type
  • 44cell line
  • 5primary cell
  • 3tissue
Organ
  • 44liver
  • 4brain
  • 3pancreas
  • 2epithelium
  • 2vasculature
  • 1blood vessel
Project
  • 52AMP
Genome assembly (visualization)
  • 52hg19
  • 31GRCh38
Lab
  • 52AMP-T2D consortium
Audit category:
  • 5missing controlled_by
BIOSAMPLE
ASSAY

52 results

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ChIP-seq
DNase-seq
cell line
HepG244
primary cell
astrocyte of the cerebellum2
brain microvascular endothelial cell1
choroid plexus epithelial cell1
skeletal muscle myoblast1
tissue
pancreas2
islet of Langerhans1
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