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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 63ChIP-seq
  • 1DNase-seq
Assay category
  • 63DNA binding
  • 1DNA accessibility
Target of assay
  • 50transcription factor
  • 13histone
  • 13histone modification
  • 8broad histone mark
  • 6RNA binding protein
  • 5chromatin remodeller
  • 5narrow histone mark
  • 1other context
  • 1other post-translational modification
Date released
  • 51November, 2017
  • 9August, 2017
  • 2December, 2017
  • 2November, 2018
Available data
  • 142fastq
  • 137bam
  • 113bigWig
  • 94bed narrowPeak
  • 64bigBed narrowPeak
  • 53bed broadPeak
  • 53bigBed broadPeak
  • 16tagAlign
  • 9tsv
  • 4bed bedMethyl
  • 4bigBed bedMethyl
  • 3bed bed3+
Organism
  • 64Homo sapiens
Biosample type
  • 53cell line
  • 9primary cell
  • 2tissue
Organ
  • 55liver
Project
  • 64AMP
Genome assembly (visualization)
  • 64hg19
  • 55GRCh38
Lab
  • 64AMP-T2D consortium
Audit category:
  • 6inconsistent control read length
BIOSAMPLE
ASSAY

64 results

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ChIP-seq
DNase-seq
cell line
HepG253
primary cell
skeletal muscle myoblast81
tissue
liver2
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