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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 140ChIP-seq
Assay category
  • 140DNA binding
Target of assay
  • 98transcription factor
  • 69recombinant protein
  • 42histone
  • 42histone modification
  • 25broad histone mark
  • 17narrow histone mark
  • 11chromatin remodeller
  • 8RNA binding protein
  • 3other context
  • 3other post-translational modification
Date released
  • 69November, 2017
  • 21November, 2018
  • 19December, 2017
  • 17October, 2018
  • 11January, 2019
  • 2December, 2018
  • 1August, 2017
Available data
  • 203fastq
  • 193bam
  • 180bigWig
  • 170bed narrowPeak
  • 140bigBed narrowPeak
  • 1zippedFastqFolder
Organism
  • 140Homo sapiens
Biosample type
  • 94cell line
  • 31tissue
  • 14in vitro differentiated cells
  • 1primary cell
Organ
  • 104liver
  • 17pancreas
  • 14epithelium
  • 9blood
  • 9bodily fluid
  • 9spleen
Project
  • 140AMP
Genome assembly (visualization)
  • 140GRCh38
  • 137hg19
Lab
  • 140AMP-T2D consortium
Audit category:
  • 1inconsistent control
Audit category:
  • 1missing controlled_by
Audit category:
  • 4inconsistent control read length
  • 1inconsistent assembly
  • 1inconsistent control run_type
BIOSAMPLE
ASSAY

140 results

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Clear Filters
ChIP-seq
cell line
HepG285
GM128789
tissue
body of pancreas17
spleen9
right lobe of liver5
in vitro differentiated cells
hepatocyte14
primary cell
skeletal muscle myoblast1
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