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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
69
ChIP-seq
9
DNase-seq
1
FAIRE-seq
Assay category
69
DNA binding
10
DNA accessibility
Target of assay
65
histone
65
histone modification
41
broad histone mark
24
narrow histone mark
4
RNA binding protein
4
transcription factor
Date released
39
May, 2019
33
October, 2019
5
June, 2019
2
November, 2017
Available data
180
bam
150
bigWig
129
bed narrowPeak
79
bigBed narrowPeak
69
tsv
13
bed broadPeak
13
bigBed broadPeak
11
bed bed3+
6
tagAlign
3
fastq
3
hic
2
bedpe bed3+
2
hdf5
1
bed bedMethyl
1
bigBed bedMethyl
1
tar
Organism
79
Homo sapiens
Biosample type
62
tissue
17
primary cell
Organ
358
liver
127
brain
104
kidney
94
heart
91
pancreas
84
limb
83
vasculature
79
blood vessel
76
epithelium
54
blood
54
bodily fluid
47
musculature of body
28
connective tissue
26
nerve
25
artery
18
ureter
13
spleen
13
vein
10
adipose tissue
6
eye
0
urinary bladder
Project
79
AMP
Genome assembly (visualization)
78
GRCh38
78
hg19
Lab
79
AMP-T2D consortium
lab.title!
Klaus Kaestner, Upenn
month_released!
August, 2022
BIOSAMPLE
ASSAY
79 results
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ChIP-seq
DNase-seq
FAIRE-seq
tissue
tibial artery
18
2
ascending aorta
13
1
thoracic aorta
12
aorta
11
coronary artery
3
2
primary cell
endothelial cell of umbilical vein
10
2
1
brain microvascular endothelial cell
2
1
kidney capillary endothelial cell
1
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