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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
402
ChIP-seq
Assay category
402
DNA binding
Target of assay
402
transcription factor
300
histone
300
histone modification
184
broad histone mark
116
narrow histone mark
90
RNA binding protein
81
recombinant protein
34
chromatin remodeller
5
other context
5
other post-translational modification
Date released
233
November, 2017
63
November, 2018
33
December, 2017
28
December, 2018
15
October, 2018
14
January, 2019
5
April, 2019
5
May, 2019
4
June, 2019
2
August, 2017
Available data
493
bigWig
482
bam
466
bed narrowPeak
451
fastq
402
bigBed narrowPeak
46
bed broadPeak
46
bigBed broadPeak
19
bed bed3+
9
tagAlign
3
tar
Organism
402
Homo sapiens
Biosample type
328
cell line
65
tissue
7
primary cell
2
in vitro differentiated cells
Organ
314
liver
51
blood
51
bodily fluid
10
pancreas
8
heart
7
epithelium
6
connective tissue
6
spleen
5
adipose tissue
5
vasculature
4
blood vessel
brain
2
kidney
1
artery
1
eye
Project
402
AMP
Genome assembly (visualization)
398
hg19
369
GRCh38
Lab
402
AMP-T2D consortium
Audit category:
28
inconsistent control
3
inconsistent ontology term
Audit category:
11
missing controlled_by
Audit category:
15
inconsistent control read length
8
inconsistent control run_type
month_released!
April, 2020
organ_slims!
brain
BIOSAMPLE
ASSAY
402 results
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Clear Filters
ChIP-seq
cell line
HepG2
277
GM12878
51
tissue
liver
33
body of pancreas
9
spleen
6
heart left ventricle
5
omental fat pad
3
+ See 7 more…
primary cell
skeletal muscle myoblast
2
cardiac fibroblast
1
cardiac muscle cell
1
epithelial cell of proximal tubule
1
kidney epithelial cell
1
+ See 1 more…
in vitro differentiated cells
hepatocyte
2
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