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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
372
ChIP-seq
Assay category
372
DNA binding
Target of assay
374
histone
374
histone modification
372
transcription factor
232
broad histone mark
142
narrow histone mark
89
RNA binding protein
81
recombinant protein
31
chromatin remodeller
5
other context
5
other post-translational modification
Date released
236
November, 2017
63
November, 2018
December, 2017
28
December, 2018
15
October, 2018
14
January, 2019
5
April, 2019
5
May, 2019
4
June, 2019
2
August, 2017
Available data
454
bigWig
443
bam
427
bed narrowPeak
412
fastq
372
bigBed narrowPeak
49
bed broadPeak
49
bigBed broadPeak
19
bed bed3+
9
tagAlign
3
tar
Organism
372
Homo sapiens
Biosample type
328
cell line
34
tissue
10
primary cell
Organ
281
liver
51
blood
51
bodily fluid
10
pancreas
8
heart
6
connective tissue
6
spleen
5
adipose tissue
5
epithelium
5
vasculature
4
blood vessel
3
brain
2
kidney
1
artery
1
eye
Project
372
AMP
Genome assembly (visualization)
368
hg19
339
GRCh38
Lab
372
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
1
inconsistent control
Audit category:
11
missing controlled_by
Audit category:
15
inconsistent control read length
8
inconsistent control run_type
month_released!
December, 2017
July, 2019
BIOSAMPLE
ASSAY
372 results
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Clear Filters
ChIP-seq
cell line
HepG2
277
GM12878
51
tissue
body of pancreas
9
spleen
6
heart left ventricle
5
liver
4
omental fat pad
3
+ See 6 more…
primary cell
skeletal muscle myoblast
2
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
cardiac fibroblast
1
cardiac muscle cell
1
+ See 4 more…
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