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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
94
ChIP-seq
50
DNase-seq
1
FAIRE-seq
Assay category
94
DNA binding
51
DNA accessibility
Target of assay
91
histone
91
histone modification
58
broad histone mark
33
narrow histone mark
3
RNA binding protein
3
transcription factor
Date released
63
November, 2017
48
June, 2019
25
May, 2019
6
October, 2017
2
November, 2018
1
July, 2019
Available data
261
bam
240
bigWig
221
bed narrowPeak
145
bigBed narrowPeak
118
tagAlign
65
bed broadPeak
56
bigBed broadPeak
53
bed bed3+
26
tsv
21
fastq
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
1
tagAlign bed3+
Organism
145
Homo sapiens
Biosample type
134
tissue
11
primary cell
Organ
308
liver
127
brain
104
kidney
94
heart
91
pancreas
84
limb
83
vasculature
79
blood vessel
62
epithelium
54
blood
54
bodily fluid
musculature of body
28
connective tissue
26
nerve
25
artery
18
ureter
13
spleen
13
vein
10
adipose tissue
6
eye
Project
145
AMP
Genome assembly (visualization)
144
GRCh38
83
hg19
Lab
145
AMP-T2D consortium
Audit category:
3
missing controlled_by
month_released!
December, 2017
organ_slims!
musculature of body
BIOSAMPLE
ASSAY
145 results
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ChIP-seq
DNase-seq
FAIRE-seq
tissue
brain
6
14
layer of hippocampus
16
caudate nucleus
12
1
temporal lobe
13
angular gyrus
12
+ See 17 more…
primary cell
astrocyte of the cerebellum
2
1
brain microvascular endothelial cell
2
1
choroid plexus epithelial cell
2
1
astrocyte of the hippocampus
1
brain pericyte
1
See all biosamples
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