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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
60
ChIP-seq
22
ATAC-seq
19
DNase-seq
1
FAIRE-seq
Assay category
60
DNA binding
42
DNA accessibility
Target of assay
53
histone
53
histone modification
30
broad histone mark
23
narrow histone mark
7
RNA binding protein
7
transcription factor
1
chromatin remodeller
Date released
40
October, 2019
18
June, 2019
14
December, 2017
14
September, 2018
5
September, 2017
4
May, 2019
4
November, 2017
3
August, 2017
Available data
354
bam
327
bigWig
257
fastq
178
bed narrowPeak
155
tsv
102
bigBed narrowPeak
80
zippedFastqFolder
24
bed broadPeak
24
bigBed broadPeak
23
bed bed3+
7
tagAlign
6
bed bedMethyl
6
bigBed bedMethyl
6
hic
5
bedpe bed3+
3
cool
2
hdf5
1
tar
Organism
102
Homo sapiens
Biosample type
61
primary cell
26
tissue
14
in vitro differentiated cells
1
cell line
Organ
358
liver
127
brain
104
kidney
94
heart
91
pancreas
84
limb
83
vasculature
79
blood vessel
76
epithelium
54
blood
54
bodily fluid
47
musculature of body
28
connective tissue
26
nerve
25
artery
18
ureter
13
spleen
13
vein
10
adipose tissue
6
eye
Project
102
AMP
Genome assembly (visualization)
101
GRCh38
96
hg19
Lab
102
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
month_released!
December, 2019
organ_slims!
lung
BIOSAMPLE
ASSAY
102 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
primary cell
endothelial cell of umbilical vein
10
2
1
pancreatic beta cell
7
pancreatic alpha cell
6
kidney epithelial cell
4
1
pancreatic acinar cell
5
+ See 12 more…
tissue
tibial nerve
24
2
in vitro differentiated cells
hepatocyte
14
cell line
glomerular visceral epithelial cell
1
See all biosamples
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