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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
94
ChIP-seq
32
DNase-seq
Assay category
94
DNA binding
32
DNA accessibility
Target of assay
91
histone
91
histone modification
58
broad histone mark
33
narrow histone mark
3
RNA binding protein
3
transcription factor
Date released
63
November, 2017
30
June, 2019
25
May, 2019
6
October, 2017
2
November, 2018
July, 2019
Available data
230
bam
206
bigWig
202
bed narrowPeak
126
bigBed narrowPeak
118
tagAlign
47
bed broadPeak
38
bigBed broadPeak
32
bed bed3+
21
fastq
15
tsv
1
bed bed3
1
tagAlign bed3+
Organism
126
Homo sapiens
Biosample type
115
tissue
11
primary cell
Organ
358
liver
126
brain
103
kidney
heart
91
pancreas
84
limb
83
vasculature
79
blood vessel
76
epithelium
54
blood
54
bodily fluid
47
musculature of body
28
connective tissue
26
nerve
25
artery
18
ureter
13
spleen
13
vein
10
adipose tissue
6
eye
Project
126
AMP
Genome assembly (visualization)
126
GRCh38
64
hg19
Lab
126
AMP-T2D consortium
Audit category:
3
missing controlled_by
month_released!
July, 2019
organ_slims!
adrenal gland
heart
BIOSAMPLE
ASSAY
126 results
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ChIP-seq
DNase-seq
tissue
brain
6
14
layer of hippocampus
16
caudate nucleus
12
1
temporal lobe
13
angular gyrus
12
+ See 14 more…
primary cell
astrocyte of the cerebellum
2
1
brain microvascular endothelial cell
2
1
choroid plexus epithelial cell
2
1
astrocyte of the hippocampus
1
brain pericyte
1
See all biosamples
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