Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
78
DNase-seq
24
ChIP-seq
1
FAIRE-seq
Assay category
79
DNA accessibility
24
DNA binding
Target of assay
22
histone
22
histone modification
12
broad histone mark
10
narrow histone mark
2
RNA binding protein
2
transcription factor
Date released
80
June, 2019
18
April, 2019
4
May, 2019
1
July, 2019
October, 2019
Available data
167
bed narrowPeak
116
bam
109
bigWig
103
bigBed narrowPeak
78
bed bed3+
78
bed broadPeak
78
bigBed broadPeak
64
xls
62
txt
20
tsv
5
csv
4
bed bedMethyl
4
bigBed bedMethyl
1
hic
Organism
103
Homo sapiens
Biosample type
87
tissue
16
primary cell
Organ
358
liver
127
brain
103
kidney
94
heart
84
pancreas
62
epithelium
54
blood
54
bodily fluid
50
vasculature
47
musculature of body
46
blood vessel
38
limb
25
connective tissue
18
ureter
13
spleen
9
adipose tissue
6
eye
5
artery
0
esophagus
0
urinary bladder
Project
103
AMP
Genome assembly (visualization)
102
GRCh38
96
hg19
Lab
103
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
month_released!
October, 2019
BIOSAMPLE
ASSAY
103 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
ChIP-seq
FAIRE-seq
tissue
kidney
13
18
1
renal cortex interstitium
11
renal pelvis
10
right kidney
10
left kidney
9
+ See 4 more…
primary cell
kidney epithelial cell
1
4
epithelial cell of proximal tubule
1
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
glomerular endothelial cell
1
+ See 3 more…
See all biosamples
Download