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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
3
DNase-seq
2
ATAC-seq
Assay category
20
DNA binding
5
DNA accessibility
Target of assay
18
histone
18
histone modification
10
broad histone mark
8
narrow histone mark
2
RNA binding protein
2
transcription factor
1
chromatin remodeller
Date released
312
November, 2017
206
June, 2019
96
May, 2019
70
November, 2018
64
April, 2019
63
October, 2019
50
December, 2017
30
December, 2018
25
August, 2017
21
January, 2019
6
October, 2017
5
October, 2018
2
July, 2019
1
November, 2020
Available data
119
fastq
114
bam
113
bigWig
93
bed narrowPeak
69
tagAlign
29
bed broadPeak
25
bigBed narrowPeak
15
bigBed broadPeak
14
bed bed3+
6
bed bedMethyl
6
bigBed bedMethyl
Organism
25
Homo sapiens
Biosample type
16
primary cell
8
tissue
1
in vitro differentiated cells
Organ
pancreas
6
liver
3
connective tissue
3
epithelium
2
adipose tissue
Project
25
AMP
Genome assembly (visualization)
25
hg19
22
GRCh38
Lab
25
AMP-T2D consortium
Audit category:
2
inconsistent assembly
2
inconsistent control read length
1
inconsistent control run_type
month_released!
April, 2020
May, 2020
organ_slims!
pancreas
BIOSAMPLE
ASSAY
25 results
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Clear Filters
ChIP-seq
DNase-seq
ATAC-seq
primary cell
skeletal muscle myoblast
14
2
tissue
liver
5
adipose tissue
1
right lobe of liver
1
subcutaneous adipose tissue
1
in vitro differentiated cells
adipocyte
1
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