Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
30
ChIP-seq
19
ATAC-seq
4
DNase-seq
1
FAIRE-seq
Assay category
30
DNA binding
24
DNA accessibility
Target of assay
30
histone
30
histone modification
18
broad histone mark
12
narrow histone mark
RNA binding protein
2
transcription factor
1
chromatin remodeller
Date released
277
November, 2017
206
June, 2019
92
May, 2019
70
October, 2019
61
April, 2019
52
November, 2018
46
December, 2017
40
August, 2017
34
October, 2018
28
December, 2018
15
January, 2019
14
September, 2018
6
October, 2017
5
September, 2017
2
July, 2019
1
November, 2020
Available data
352
fastq
346
bam
336
bigWig
181
bed narrowPeak
115
tsv
85
tagAlign
54
bigBed narrowPeak
39
bed broadPeak
31
bed bed3+
13
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
1
csv
Organism
48
Homo sapiens
Biosample type
31
primary cell
22
tissue
1
in vitro differentiated cells
Organ
31
pancreas
17
epithelium
6
liver
3
connective tissue
2
adipose tissue
Project
54
AMP
Genome assembly (visualization)
54
hg19
51
GRCh38
Lab
54
AMP-T2D consortium
Audit category:
6
inconsistent control read length
3
inconsistent assembly
1
inconsistent control run_type
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
54 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
primary cell
skeletal muscle myoblast
12
2
pancreatic beta cell
5
pancreatic acinar cell
4
pancreatic alpha cell
4
pancreatic ductal cell
4
tissue
pancreas
12
liver
5
islet of Langerhans
1
1
adipose tissue
1
right lobe of liver
1
+ See 1 more…
in vitro differentiated cells
adipocyte
1
See all biosamples
Download