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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
108
ChIP-seq
8
DNase-seq
3
ATAC-seq
1
FAIRE-seq
Assay category
108
DNA binding
12
DNA accessibility
Target of assay
75
histone
75
histone modification
48
broad histone mark
33
transcription factor
27
narrow histone mark
4
RNA binding protein
3
chromatin remodeller
Date released
312
November, 2017
210
June, 2019
97
May, 2019
73
November, 2018
70
October, 2019
64
April, 2019
50
December, 2017
45
October, 2018
42
August, 2017
30
December, 2018
21
January, 2019
14
September, 2018
6
October, 2017
5
September, 2017
2
July, 2019
1
November, 2020
Available data
344
bam
279
bigWig
261
bed narrowPeak
120
bigBed narrowPeak
94
fastq
49
tagAlign
23
bed bed3+
16
tsv
9
bed broadPeak
9
bigBed broadPeak
4
hic
3
bedpe bed3+
1
hdf5
1
tagAlign bed3+
1
tar
Organism
120
Homo sapiens
Biosample type
83
tissue
16
in vitro differentiated cells
13
primary cell
8
cell line
Organ
50
liver
46
limb
33
blood vessel
33
vasculature
28
epithelium
26
nerve
20
artery
13
vein
7
pancreas
3
connective tissue
1
adipose tissue
1
kidney
Project
120
AMP
Genome assembly (visualization)
120
hg19
116
GRCh38
Lab
120
AMP-T2D consortium
Audit category:
27
inconsistent control
month_released!
August, 2022
BIOSAMPLE
ASSAY
120 results
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Clear Filters
ChIP-seq
DNase-seq
ATAC-seq
FAIRE-seq
tissue
liver
29
tibial nerve
24
2
tibial artery
18
2
right lobe of liver
7
adipose tissue
1
in vitro differentiated cells
hepatocyte
14
adipocyte
2
primary cell
endothelial cell of umbilical vein
10
2
1
cell line
Panc1
6
1
glomerular visceral epithelial cell
1
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