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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
24
ChIP-seq
Assay category
24
DNA binding
Target of assay
390
histone
390
histone modification
354
transcription factor
242
broad histone mark
148
narrow histone mark
83
RNA binding protein
81
recombinant protein
24
chromatin remodeller
5
other context
5
other post-translational modification
Date released
15
November, 2017
5
November, 2018
3
December, 2017
1
August, 2017
Available data
26
bam
26
bed narrowPeak
26
bigWig
26
fastq
24
bigBed narrowPeak
5
bed broadPeak
5
bigBed broadPeak
Organism
24
Homo sapiens
Biosample type
20
cell line
2
tissue
1
in vitro differentiated cells
1
primary cell
Organ
23
liver
blood
10
bodily fluid
1
epithelium
Project
24
AMP
Genome assembly (visualization)
24
hg19
22
GRCh38
Lab
24
AMP-T2D consortium
Audit category:
2
inconsistent control
Audit category:
6
missing controlled_by
Audit category:
11
inconsistent control read length
8
inconsistent control run_type
organ_slims!
blood
BIOSAMPLE
ASSAY
24 results
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ChIP-seq
cell line
HepG2
20
tissue
liver
2
in vitro differentiated cells
hepatocyte
1
primary cell
skeletal muscle myoblast
1
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