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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
356
ChIP-seq
Assay category
356
DNA binding
Target of assay
356
histone
356
histone modification
221
broad histone mark
135
narrow histone mark
91
transcription factor
38
RNA binding protein
11
chromatin remodeller
3
other context
3
other post-translational modification
Date released
92
May, 2019
60
November, 2017
59
April, 2019
58
October, 2019
30
October, 2018
25
August, 2017
19
June, 2019
7
January, 2019
6
October, 2017
Available data
785
bigWig
769
bed narrowPeak
704
bam
356
bigBed narrowPeak
262
tagAlign
185
fastq
51
bed broadPeak
22
bed bed3+
16
bigBed broadPeak
1
tagAlign bed3+
Organism
350
Homo sapiens
Biosample type
302
tissue
47
primary cell
7
cell line
Organ
91
brain
66
vasculature
65
blood vessel
56
heart
49
pancreas
48
limb
liver
29
epithelium
24
nerve
22
kidney
20
artery
14
musculature of body
10
vein
9
connective tissue
6
spleen
1
adipose tissue
1
blood
1
bodily fluid
1
eye
Project
356
AMP
Genome assembly (visualization)
355
GRCh38
304
hg19
Lab
356
AMP-T2D consortium
Audit category:
17
inconsistent ontology term
Audit category:
3
missing controlled_by
Audit category:
6
inconsistent control read length
3
inconsistent assembly
1
inconsistent control run_type
organ_slims!
liver
pituitary gland
BIOSAMPLE
ASSAY
356 results
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Clear Filters
ChIP-seq
tissue
tibial nerve
24
heart left ventricle
23
kidney
18
tibial artery
18
body of pancreas
17
+ See 23 more…
primary cell
skeletal muscle myoblast
12
endothelial cell of umbilical vein
10
skeletal muscle satellite cell
7
mesenchymal stem cell
6
kidney epithelial cell
3
+ See 8 more…
cell line
Panc1
6
GM12878
1
See all biosamples
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