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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
DNase-seq
35
ChIP-seq
Assay category
37
DNA accessibility
35
DNA binding
Target of assay
34
histone
34
histone modification
22
broad histone mark
12
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
43
June, 2019
20
October, 2019
9
May, 2019
Available data
159
bam
153
bigWig
134
bed narrowPeak
72
bigBed narrowPeak
67
tsv
50
bed broadPeak
38
bed bed3+
37
bigBed broadPeak
21
tagAlign
4
bed bedMethyl
4
bigBed bedMethyl
2
bedpe bed3+
2
fastq
2
hic
1
txt
Organism
72
Homo sapiens
Biosample type
63
tissue
9
primary cell
Organ
358
liver
127
brain
104
kidney
94
heart
91
pancreas
84
limb
83
vasculature
79
blood vessel
76
epithelium
54
blood
54
bodily fluid
47
musculature of body
28
connective tissue
26
nerve
25
artery
18
ureter
13
spleen
13
vein
10
adipose tissue
6
eye
Project
72
AMP
Genome assembly (visualization)
72
hg19
71
GRCh38
Lab
72
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
organ_slims!
small intestine
BIOSAMPLE
ASSAY
72 results
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DNase-seq
ChIP-seq
tissue
tibial artery
2
18
muscle of leg
13
6
muscle of arm
17
coronary artery
2
3
forelimb muscle
1
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primary cell
skeletal muscle satellite cell
7
skeletal muscle cell
1
1
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