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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
111
ChIP-seq
44
DNase-seq
1
FAIRE-seq
Assay category
111
DNA binding
45
DNA accessibility
Target of assay
101
histone
101
histone modification
65
broad histone mark
36
narrow histone mark
10
transcription factor
4
RNA binding protein
3
other context
3
other post-translational modification
Date released
59
October, 2019
45
May, 2019
37
June, 2019
6
January, 2019
4
November, 2018
3
December, 2018
2
November, 2017
Available data
292
bam
236
bigWig
214
bed narrowPeak
156
bigBed narrowPeak
75
tsv
48
bed broadPeak
48
bigBed broadPeak
46
bed bed3+
27
fastq
6
tagAlign
4
bed bedMethyl
4
bigBed bedMethyl
3
hic
2
bedpe bed3+
2
hdf5
1
tar
Organism
156
Homo sapiens
Biosample type
139
tissue
17
primary cell
Organ
358
liver
127
brain
104
kidney
94
heart
85
pancreas
84
limb
83
vasculature
79
blood vessel
76
epithelium
54
blood
54
bodily fluid
47
musculature of body
28
connective tissue
26
nerve
25
artery
18
ureter
13
spleen
13
vein
10
adipose tissue
6
eye
Project
156
AMP
Genome assembly (visualization)
155
hg19
154
GRCh38
Lab
156
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
156 results
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ChIP-seq
DNase-seq
FAIRE-seq
tissue
tibial nerve
24
2
tibial artery
18
2
muscle of leg
6
13
muscle of arm
17
ascending aorta
13
1
+ See 6 more…
primary cell
endothelial cell of umbilical vein
10
2
1
brain microvascular endothelial cell
2
1
kidney capillary endothelial cell
1
See all biosamples
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