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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
43
DNase-seq
4
ChIP-seq
1
FAIRE-seq
Assay category
44
DNA accessibility
4
DNA binding
Target of assay
95
histone
histone modification
61
broad histone mark
34
narrow histone mark
4
RNA binding protein
4
transcription factor
Date released
37
June, 2019
7
October, 2019
3
May, 2019
1
November, 2017
Available data
168
bam
123
bigWig
105
bed narrowPeak
74
tsv
48
bigBed narrowPeak
45
bed bed3+
44
bed broadPeak
44
bigBed broadPeak
6
tagAlign
3
hic
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
fastq
2
hdf5
1
tar
Organism
48
Homo sapiens
Biosample type
42
tissue
6
primary cell
Organ
323
liver
82
kidney
53
blood
53
bodily fluid
47
epithelium
42
pancreas
38
heart
36
brain
36
limb
33
musculature of body
19
connective tissue
18
ureter
17
vasculature
14
blood vessel
9
adipose tissue
7
spleen
5
artery
5
eye
3
vein
2
nerve
Project
48
AMP
Genome assembly (visualization)
47
GRCh38
47
hg19
Lab
48
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
48 results
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DNase-seq
ChIP-seq
FAIRE-seq
tissue
muscle of arm
17
muscle of leg
13
coronary artery
2
1
ascending aorta
1
1
tibial artery
2
+ See 4 more…
primary cell
endothelial cell of umbilical vein
2
1
brain microvascular endothelial cell
1
1
kidney capillary endothelial cell
1
See all biosamples
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