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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
53
ChIP-seq
42
DNase-seq
1
FAIRE-seq
Assay category
53
DNA binding
43
DNA accessibility
Target of assay
79
histone
79
histone modification
49
broad histone mark
narrow histone mark
4
RNA binding protein
4
transcription factor
Date released
42
June, 2019
29
May, 2019
24
October, 2019
1
November, 2017
Available data
206
bam
183
bigWig
154
bed narrowPeak
96
bigBed narrowPeak
77
tsv
53
bed broadPeak
45
bed bed3+
45
bigBed broadPeak
16
tagAlign
5
bed bedMethyl
5
bigBed bedMethyl
5
hic
4
bedpe bed3+
4
fastq
2
hdf5
1
tar
1
txt
Organism
96
Homo sapiens
Biosample type
80
tissue
16
primary cell
Organ
344
liver
94
brain
94
kidney
72
heart
72
pancreas
70
limb
61
epithelium
58
vasculature
55
blood vessel
53
blood
53
bodily fluid
41
musculature of body
23
connective tissue
19
artery
18
nerve
18
ureter
11
spleen
9
adipose tissue
8
vein
5
eye
Project
96
AMP
Genome assembly (visualization)
95
GRCh38
95
hg19
Lab
96
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
organ_slims!
esophagus
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
96 results
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ChIP-seq
DNase-seq
FAIRE-seq
tissue
muscle of arm
17
muscle of leg
4
13
tibial artery
14
2
ascending aorta
9
1
thoracic aorta
8
+ See 4 more…
primary cell
endothelial cell of umbilical vein
5
2
1
skeletal muscle satellite cell
4
brain microvascular endothelial cell
1
1
kidney capillary endothelial cell
1
skeletal muscle cell
1
See all biosamples
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