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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
128
ChIP-seq
35
DNase-seq
22
ATAC-seq
3
FAIRE-seq
Assay category
128
DNA binding
60
DNA accessibility
Target of assay
114
histone
114
histone modification
71
broad histone mark
43
narrow histone mark
14
transcription factor
10
RNA binding protein
Date released
40
May, 2019
40
October, 2018
40
October, 2019
27
June, 2019
17
August, 2017
14
September, 2018
5
September, 2017
3
November, 2018
2
November, 2017
Available data
887
bam
791
bigWig
485
tsv
474
fastq
361
bed narrowPeak
188
bigBed narrowPeak
80
zippedFastqFolder
58
bed bed3+
52
bed broadPeak
38
bigBed broadPeak
25
tagAlign
10
hic
9
bedpe bed3+
7
bed bedMethyl
7
bigBed bedMethyl
6
txt
3
cool
3
hdf5
1
bedpe
1
tar
Organism
182
Homo sapiens
Biosample type
142
tissue
39
primary cell
7
cell line
Organ
358
liver
127
brain
104
kidney
94
heart
91
pancreas
84
limb
83
vasculature
79
blood vessel
76
epithelium
54
blood
bodily fluid
47
musculature of body
28
connective tissue
26
nerve
25
artery
18
ureter
13
spleen
13
vein
10
adipose tissue
6
eye
Project
188
AMP
Genome assembly (visualization)
185
GRCh38
185
hg19
Lab
188
AMP-T2D consortium
Audit category:
5
inconsistent control read length
1
inconsistent assembly
organ_slims!
bodily fluid
BIOSAMPLE
ASSAY
188 results
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Clear Filters
ChIP-seq
DNase-seq
ATAC-seq
FAIRE-seq
tissue
body of pancreas
26
4
tibial artery
18
2
pancreas
13
2
1
ascending aorta
13
1
endocrine pancreas
14
+ See 7 more…
primary cell
endothelial cell of umbilical vein
10
2
1
pancreatic beta cell
7
pancreatic alpha cell
6
pancreatic acinar cell
5
pancreatic ductal cell
4
+ See 2 more…
cell line
Panc1
6
1
See all biosamples
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