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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
ChIP-seq
1
DNase-seq
Assay category
66
DNA binding
1
DNA accessibility
Target of assay
57
transcription factor
10
RNA binding protein
10
chromatin remodeller
7
histone
7
histone modification
4
broad histone mark
3
narrow histone mark
3
other context
3
other post-translational modification
Date released
30
December, 2018
21
January, 2019
16
November, 2018
Available data
84
bam
84
fastq
71
bigWig
68
bed narrowPeak
67
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
2
tsv
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
67
Homo sapiens
Biosample type
54
cell line
13
tissue
Organ
358
liver
127
brain
104
kidney
94
heart
91
pancreas
84
limb
83
vasculature
79
blood vessel
76
epithelium
54
blood
54
bodily fluid
47
musculature of body
28
connective tissue
26
nerve
25
artery
18
ureter
13
spleen
13
vein
10
adipose tissue
6
eye
0
ovary
Project
67
AMP
Genome assembly (visualization)
67
GRCh38
67
hg19
Lab
67
AMP-T2D consortium
Audit category:
1
inconsistent control
BIOSAMPLE
ASSAY
67 results
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ChIP-seq
DNase-seq
cell line
GM12878
54
tissue
spleen
12
1
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