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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 94ChIP-seq
  • 32DNase-seq
  • 1FAIRE-seq
Assay category
  • 94DNA binding
  • 33DNA accessibility
Target of assay
  • 91histone
  • 91histone modification
  • 58broad histone mark
  • 33narrow histone mark
  • 3RNA binding protein
  • 3transcription factor
Date released
  • 63November, 2017
  • 30June, 2019
  • 25May, 2019
  • 6October, 2017
  • 2November, 2018
  • 1July, 2019
Available data
  • 243bam
  • 222bigWig
  • 203bed narrowPeak
  • 127bigBed narrowPeak
  • 118tagAlign
  • 47bed broadPeak
  • 38bigBed broadPeak
  • 35bed bed3+
  • 26tsv
  • 21fastq
  • 3hdf5
  • 2bed bedMethyl
  • 2bigBed bedMethyl
  • 1bed bed3
  • 1tagAlign bed3+
Organism
  • 127Homo sapiens
Biosample type
  • 116tissue
  • 11primary cell
Organ
  • 358liver
  • 127brain
  • 104kidney
  • 94heart
  • 91pancreas
  • 84limb
  • 83vasculature
  • 79blood vessel
  • 76epithelium
  • 54blood
  • 54bodily fluid
  • 47musculature of body
  • 28connective tissue
  • 26nerve
  • 25artery
  • 18ureter
  • 13spleen
  • 13vein
  • 10adipose tissue
  • 6eye
Project
  • 127AMP
Genome assembly (visualization)
  • 126GRCh38
  • 65hg19
Lab
  • 127AMP-T2D consortium
Audit category:
  • 3missing controlled_by
BIOSAMPLE
ASSAY

127 results

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Clear Filters
ChIP-seq
DNase-seq
FAIRE-seq
tissue
brain614
layer of hippocampus16
caudate nucleus121
temporal lobe13
angular gyrus12
primary cell
astrocyte of the cerebellum21
brain microvascular endothelial cell21
choroid plexus epithelial cell21
astrocyte of the hippocampus1
brain pericyte1
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