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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 79DNase-seq
  • 24ChIP-seq
  • 1FAIRE-seq
Assay category
  • 80DNA accessibility
  • 24DNA binding
Target of assay
  • 22histone
  • 22histone modification
  • 12broad histone mark
  • 10narrow histone mark
  • 2RNA binding protein
  • 2transcription factor
Date released
  • 80June, 2019
  • 18April, 2019
  • 4May, 2019
  • 1July, 2019
  • 1October, 2019
Available data
  • 183bed narrowPeak
  • 144bam
  • 131bigWig
  • 104bigBed narrowPeak
  • 78bed bed3+
  • 78bed broadPeak
  • 78bigBed broadPeak
  • 64xls
  • 62txt
  • 24tsv
  • 5csv
  • 4bed bedMethyl
  • 4bigBed bedMethyl
  • 1hic
Organism
  • 104Homo sapiens
Biosample type
  • 87tissue
  • 16primary cell
  • 1cell line
Organ
  • 358liver
  • 127brain
  • 104kidney
  • 94heart
  • 91pancreas
  • 84limb
  • 83vasculature
  • 79blood vessel
  • 76epithelium
  • 54blood
  • 54bodily fluid
  • 47musculature of body
  • 28connective tissue
  • 26nerve
  • 25artery
  • 18ureter
  • 13spleen
  • 13vein
  • 10adipose tissue
  • 6eye
Project
  • 104AMP
Genome assembly (visualization)
  • 103GRCh38
  • 97hg19
Lab
  • 104AMP-T2D consortium
Audit category:
  • 5inconsistent ontology term
BIOSAMPLE
ASSAY

104 results

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Clear Filters
DNase-seq
ChIP-seq
FAIRE-seq
tissue
kidney13181
renal cortex interstitium11
renal pelvis10
right kidney10
left kidney9
primary cell
kidney epithelial cell14
epithelial cell of proximal tubule12
glomerular visceral epithelial cell2
kidney tubule cell2
glomerular endothelial cell1
cell line
glomerular visceral epithelial cell1
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