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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
ChIP-seq
39
DNase-seq
1
FAIRE-seq
Assay category
66
DNA binding
40
DNA accessibility
Target of assay
66
histone
66
histone modification
43
broad histone mark
23
narrow histone mark
Date released
59
October, 2019
41
June, 2019
6
May, 2019
Available data
151
bam
135
bigWig
127
bed narrowPeak
106
bigBed narrowPeak
54
bed broadPeak
41
bigBed broadPeak
40
bed bed3+
15
tagAlign
15
tsv
4
bed bedMethyl
4
bigBed bedMethyl
4
hic
3
bedpe bed3+
2
fastq
1
tar
1
txt
Organism
106
Homo sapiens
Biosample type
84
tissue
22
primary cell
Organ
358
liver
127
brain
104
kidney
94
heart
91
pancreas
84
limb
83
vasculature
79
blood vessel
76
epithelium
54
blood
54
bodily fluid
47
musculature of body
28
connective tissue
26
nerve
25
artery
18
ureter
13
spleen
13
vein
10
adipose tissue
6
eye
Project
106
AMP
Genome assembly (visualization)
106
hg19
104
GRCh38
Lab
106
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
organ_slims!
gonad
BIOSAMPLE
ASSAY
106 results
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ChIP-seq
DNase-seq
FAIRE-seq
tissue
tibial nerve
24
2
tibial artery
18
2
muscle of leg
6
13
muscle of arm
17
forelimb muscle
1
+ See 1 more…
primary cell
endothelial cell of umbilical vein
10
2
1
skeletal muscle satellite cell
7
skeletal muscle cell
1
1
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