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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 71ChIP-seq
  • 11DNase-seq
  • 1FAIRE-seq
Assay category
  • 71DNA binding
  • 12DNA accessibility
Target of assay
  • 66histone
  • 66histone modification
  • 41broad histone mark
  • 25narrow histone mark
  • 5RNA binding protein
  • 5transcription factor
Date released
  • 39May, 2019
  • 33October, 2019
  • 7June, 2019
  • 4November, 2017
Available data
  • 185bam
  • 155bigWig
  • 133bed narrowPeak
  • 83bigBed narrowPeak
  • 68tsv
  • 17bed broadPeak
  • 17bigBed broadPeak
  • 13bed bed3+
  • 6fastq
  • 6tagAlign
  • 3hic
  • 2bed bedMethyl
  • 2bedpe bed3+
  • 2bigBed bedMethyl
  • 2hdf5
  • 1tar
Organism
  • 83Homo sapiens
Biosample type
  • 62tissue
  • 21primary cell
Organ
  • 358liver
  • 127brain
  • 104kidney
  • 94heart
  • 91pancreas
  • 84limb
  • 83vasculature
  • 79blood vessel
  • 76epithelium
  • 54blood
  • 54bodily fluid
  • 47musculature of body
  • 28connective tissue
  • 26nerve
  • 25artery
  • 18ureter
  • 13spleen
  • 13vein
  • 10adipose tissue
  • 6eye
Project
  • 83AMP
Genome assembly (visualization)
  • 82GRCh38
  • 82hg19
Lab
  • 83AMP-T2D consortium
Audit category:
  • 1inconsistent ontology term
BIOSAMPLE
ASSAY

83 results

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Clear Filters
ChIP-seq
DNase-seq
FAIRE-seq
tissue
tibial artery182
ascending aorta131
thoracic aorta12
aorta11
coronary artery32
primary cell
endothelial cell of umbilical vein1021
brain microvascular endothelial cell21
choroid plexus epithelial cell21
kidney capillary endothelial cell1
smooth muscle cell of the brain vasculature1
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