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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
DNase-seq
9
ChIP-seq
3
ATAC-seq
3
FAIRE-seq
Assay category
31
DNA accessibility
9
DNA binding
Target of assay
6
histone
6
histone modification
4
broad histone mark
3
transcription factor
2
RNA binding protein
2
narrow histone mark
Date released
29
June, 2019
3
October, 2019
2
December, 2017
2
July, 2019
2
November, 2018
1
August, 2017
1
October, 2018
Available data
483
bam
467
bigWig
302
tsv
173
bed narrowPeak
129
fastq
116
tagAlign
68
bed bed3+
40
bigBed narrowPeak
26
bed broadPeak
24
bigBed broadPeak
8
hic
7
bedpe bed3+
6
bed bed3
5
txt
3
cool
2
csv
1
bedpe
1
tagAlign bed3+
Organism
40
Homo sapiens
Biosample type
29
tissue
9
primary cell
2
in vitro differentiated cells
Organ
10
brain
10
connective tissue
7
heart
6
kidney
3
liver
3
pancreas
2
epithelium
2
eye
1
adipose tissue
Project
40
AMP
Genome assembly (visualization)
34
GRCh38
30
hg19
Lab
40
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
BIOSAMPLE
ASSAY
40 results
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DNase-seq
ChIP-seq
ATAC-seq
FAIRE-seq
tissue
heart
4
frontal cortex
2
1
kidney
2
1
liver
1
2
brain
2
+ See 12 more…
primary cell
mesenchymal stem cell
6
cardiac fibroblast
1
kidney glomerular epithelial cell
1
kidney tubule cell
1
in vitro differentiated cells
adipocyte
2
See all biosamples
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