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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
326
ChIP-seq
162
DNase-seq
24
ATAC-seq
1
FAIRE-seq
Assay category
326
DNA binding
187
DNA accessibility
Target of assay
292
histone
292
histone modification
193
broad histone mark
99
narrow histone mark
34
transcription factor
20
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
Date released
150
June, 2019
85
May, 2019
63
April, 2019
57
November, 2017
44
October, 2019
37
October, 2018
24
August, 2017
14
September, 2018
13
November, 2018
6
January, 2019
6
October, 2017
5
December, 2017
5
September, 2017
3
December, 2018
1
November, 2020
Available data
2233
bam
2091
bigWig
1229
tsv
1089
bed narrowPeak
728
fastq
513
bigBed narrowPeak
256
tagAlign
197
bed broadPeak
166
bed bed3+
162
bigBed broadPeak
153
txt
153
zippedFastqFolder
64
xls
16
bed bedMethyl
16
bigBed bedMethyl
11
hic
10
bedpe bed3+
6
csv
5
bed bed3
1
vcf
Organism
507
Homo sapiens
Biosample type
479
tissue
32
primary cell
2
cell line
Organ
106
brain
85
kidney
82
heart
80
limb
74
pancreas
54
blood vessel
54
vasculature
38
musculature of body
26
epithelium
26
nerve
21
artery
18
ureter
15
liver
14
connective tissue
13
spleen
9
adipose tissue
2
blood
2
bodily fluid
1
eye
1
vein
Project
513
AMP
Genome assembly (visualization)
511
GRCh38
451
hg19
Lab
513
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
1
inconsistent assembly
BIOSAMPLE
ASSAY
513 results
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Clear Filters
ChIP-seq
DNase-seq
ATAC-seq
FAIRE-seq
tissue
heart left ventricle
27
2
kidney
18
11
tibial nerve
24
2
body of pancreas
19
4
heart
7
14
+ See 47 more…
primary cell
pancreatic beta cell
7
pancreatic alpha cell
6
pancreatic acinar cell
5
pancreatic ductal cell
4
cardiac fibroblast
2
+ See 8 more…
cell line
GM12878
2
See all biosamples
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