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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 93ChIP-seq
Assay category
  • 93DNA binding
Target of assay
  • 405transcription factor
  • 391histone
  • 391histone modification
  • 242broad histone mark
  • 149narrow histone mark
  • 93RNA binding protein
  • 81recombinant protein
  • 34chromatin remodeller
  • 5other context
  • 5other post-translational modification
Date released
  • 35November, 2017
  • 21November, 2018
  • 11October, 2018
  • 6January, 2019
  • 5May, 2019
  • 4December, 2017
  • 4June, 2019
  • 3April, 2019
  • 2August, 2017
  • 2December, 2018
Available data
  • 106bigWig
  • 105bed narrowPeak
  • 103bam
  • 93bigBed narrowPeak
  • 89fastq
  • 9bed broadPeak
  • 9bigBed broadPeak
  • 2bed bed3+
  • 1tar
Organism
  • 93Homo sapiens
Biosample type
  • 61cell line
  • 20tissue
  • 10primary cell
  • 2in vitro differentiated cells
Organ
  • 55liver
  • 10blood
  • 10bodily fluid
  • 7epithelium
  • 6connective tissue
  • 6heart
  • 6pancreas
  • 5adipose tissue
  • 5vasculature
  • 4blood vessel
  • 3brain
  • 2kidney
  • 1artery
  • 1eye
Project
  • 93AMP
Genome assembly (visualization)
  • 92hg19
  • 88GRCh38
Lab
  • 93AMP-T2D consortium
Audit category:
  • 3inconsistent ontology term
Audit category:
  • 2missing controlled_by
Audit category:
  • 6inconsistent control read length
  • 3inconsistent control run_type
BIOSAMPLE
ASSAY

93 results

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Clear Filters
ChIP-seq
cell line
HepG251
GM1287810
tissue
body of pancreas5
heart left ventricle3
omental fat pad3
subcutaneous adipose tissue2
ascending aorta1
primary cell
skeletal muscle myoblast2
astrocyte of the cerebellum1
brain microvascular endothelial cell1
cardiac fibroblast1
cardiac muscle cell1
in vitro differentiated cells
hepatocyte2
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