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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 149ChIP-seq
Assay category
  • 149DNA binding
Target of assay
  • 405transcription factor
  • 391histone
  • 391histone modification
  • 242broad histone mark
  • 149narrow histone mark
  • 93RNA binding protein
  • 81recombinant protein
  • 34chromatin remodeller
  • 5other context
  • 5other post-translational modification
Date released
  • 34May, 2019
  • 28November, 2017
  • 22April, 2019
  • 20October, 2019
  • 12August, 2017
  • 11June, 2019
  • 11October, 2018
  • 7December, 2017
  • 3January, 2019
  • 1October, 2017
Available data
  • 440bigWig
  • 429bed narrowPeak
  • 405bam
  • 174tagAlign
  • 149bigBed narrowPeak
  • 110fastq
  • 29bed broadPeak
  • 14bigBed broadPeak
  • 13bed bed3+
  • 1tagAlign bed3+
Organism
  • 147Homo sapiens
Biosample type
  • 108tissue
  • 26primary cell
  • 10cell line
  • 5in vitro differentiated cells
Organ
  • 33brain
  • 25vasculature
  • 24blood vessel
  • 22heart
  • 19pancreas
  • 15epithelium
  • 14limb
  • 14liver
  • 10kidney
  • 8nerve
  • 6artery
  • 6musculature of body
  • 5connective tissue
  • 5vein
  • 2spleen
  • 1adipose tissue
  • 1blood
  • 1bodily fluid
  • 1eye
Project
  • 149AMP
Genome assembly (visualization)
  • 148GRCh38
  • 133hg19
Lab
  • 149AMP-T2D consortium
Audit category:
  • 9inconsistent ontology term
Audit category:
  • 2missing controlled_by
Audit category:
  • 8inconsistent control read length
  • 1inconsistent assembly
  • 1inconsistent control run_type
BIOSAMPLE
ASSAY

149 results

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Clear Filters
ChIP-seq
tissue
heart left ventricle8
kidney8
tibial nerve8
body of pancreas6
endocrine pancreas6
primary cell
skeletal muscle myoblast6
endothelial cell of umbilical vein5
skeletal muscle satellite cell3
cardiac fibroblast2
mesenchymal stem cell2
cell line
HepG26
Panc13
GM128781
in vitro differentiated cells
hepatocyte5
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