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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 405ChIP-seq
Assay category
  • 405DNA binding
Target of assay
  • 405transcription factor
  • 391histone
  • 391histone modification
  • 242broad histone mark
  • 149narrow histone mark
  • 93RNA binding protein
  • 81recombinant protein
  • 34chromatin remodeller
  • 5other context
  • 5other post-translational modification
Date released
  • 236November, 2017
  • 63November, 2018
  • 33December, 2017
  • 28December, 2018
  • 15October, 2018
  • 14January, 2019
  • 5April, 2019
  • 5May, 2019
  • 4June, 2019
  • 2August, 2017
Available data
  • 496bigWig
  • 485bam
  • 469bed narrowPeak
  • 454fastq
  • 405bigBed narrowPeak
  • 49bed broadPeak
  • 49bigBed broadPeak
  • 19bed bed3+
  • 9tagAlign
  • 3tar
Organism
  • 405Homo sapiens
Biosample type
  • 328cell line
  • 65tissue
  • 10primary cell
  • 2in vitro differentiated cells
Organ
  • 314liver
  • 51blood
  • 51bodily fluid
  • 10pancreas
  • 8heart
  • 7epithelium
  • 6connective tissue
  • 6spleen
  • 5adipose tissue
  • 5vasculature
  • 4blood vessel
  • 3brain
  • 2kidney
  • 1artery
  • 1eye
Project
  • 405AMP
Genome assembly (visualization)
  • 401hg19
  • 372GRCh38
Lab
  • 405AMP-T2D consortium
Audit category:
  • 28inconsistent control
  • 3inconsistent ontology term
Audit category:
  • 11missing controlled_by
Audit category:
  • 15inconsistent control read length
  • 8inconsistent control run_type
BIOSAMPLE
ASSAY

405 results

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Clear Filters
ChIP-seq
cell line
HepG2277
GM1287851
tissue
liver33
body of pancreas9
spleen6
heart left ventricle5
omental fat pad3
primary cell
skeletal muscle myoblast2
astrocyte of the cerebellum1
brain microvascular endothelial cell1
cardiac fibroblast1
cardiac muscle cell1
in vitro differentiated cells
hepatocyte2
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