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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
3
ATAC-seq
Assay category
20
DNA binding
3
DNA accessibility
Target of assay
20
histone
20
histone modification
12
broad histone mark
8
narrow histone mark
Date released
40
May, 2021
40
May, 2024
20
August, 2017
20
May, 2022
16
August, 2021
8
January, 2018
7
August, 2020
4
July, 2019
4
March, 2020
4
October, 2019
3
February, 2023
3
September, 2020
1
April, 2019
1
November, 2017
1
October, 2017
Available data
363
fastq
bam
275
bigWig
207
bed narrowPeak
105
tsv
85
tagAlign
42
bigBed narrowPeak
41
bed broadPeak
37
bed bed3+
15
bigBed broadPeak
10
bed bed3
7
txt
6
bed bedMethyl
6
bigBed bedMethyl
3
bed bedgraph
Organism
23
Homo sapiens
Biosample type
20
tissue
3
in vitro differentiated cells
Organ
13
musculature of body
6
pancreas
1
adipose tissue
1
connective tissue
Project
23
AMP
Genome assembly (visualization)
23
hg19
Lab
20
AMP-T2D consortium
3
Struan F.A. Grant, CHOP
Audit category:
1
inconsistent ontology term
files.file_type!
bam
BIOSAMPLE
ASSAY
23 results
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Clear Filters
ChIP-seq
ATAC-seq
tissue
skeletal muscle tissue
13
islet of Langerhans
6
subcutaneous abdominal adipose tissue
1
in vitro differentiated cells
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
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