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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
331
ChIP-seq
Assay category
331
DNA binding
Target of assay
331
transcription factor
81
recombinant protein
80
histone modification
79
histone
56
RNA binding protein
50
narrow histone mark
29
broad histone mark
23
chromatin remodeller
13
control
2
other context
2
other post-translational modification
Date released
237
November, 2017
48
November, 2018
33
December, 2017
11
August, 2021
2
August, 2017
Available data
333
bigWig
329
bed narrowPeak
327
fastq
326
bam
314
bigBed narrowPeak
44
bed broadPeak
44
bigBed broadPeak
3
tar
bed bed3+
Organism
331
Homo sapiens
Biosample type
292
cell line
37
tissue
2
in vitro differentiated cells
Organ
331
liver
51
blood
51
bodily fluid
30
connective tissue
17
heart
13
adipose tissue
12
pancreas
9
epithelium
9
kidney
9
vasculature
8
blood vessel
6
spleen
5
artery
3
brain
3
embryo
1
eye
Project
331
AMP
Genome assembly (visualization)
327
hg19
284
GRCh38
Lab
320
AMP-T2D consortium
11
Bing Ren, UCSD
Audit category:
27
inconsistent control
Audit category:
11
missing controlled_by
Audit category:
15
inconsistent control read length
8
inconsistent control run_type
files.file_type!
bed bed3+
BIOSAMPLE
ASSAY
331 results
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Clear Filters
ChIP-seq
cell line
HepG2
292
tissue
liver
35
right lobe of liver
2
in vitro differentiated cells
hepatocyte
2
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