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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
total RNA-seq
4
ATAC-seq
Assay category
28
Transcription
4
DNA accessibility
Target of assay
histone
19
histone modification
11
narrow histone mark
8
broad histone mark
Date released
551
February, 2021
259
November, 2017
233
May, 2020
191
June, 2019
187
May, 2021
164
July, 2018
150
August, 2017
85
July, 2019
80
November, 2018
49
April, 2018
42
December, 2017
40
September, 2018
38
October, 2019
30
December, 2018
28
August, 2021
21
November, 2019
20
May, 2022
19
January, 2019
17
March, 2020
17
October, 2018
15
February, 2018
8
January, 2018
8
October, 2017
7
August, 2020
5
April, 2019
5
December, 2019
5
May, 2019
5
May, 2024
5
November, 2020
5
September, 2017
3
August, 2018
3
June, 2018
3
September, 2020
Available data
60
tsv
36
bam
32
bigWig
23
fastq
12
bedpe bed3+
10
hic
2
ibed
Organism
32
Homo sapiens
Biosample type
17
in vitro differentiated cells
9
tissue
6
cell line
Organ
7
pancreas
4
embryo
4
epithelium
2
heart
2
musculature of body
1
blood vessel
1
liver
1
vasculature
Project
30
AMP
2
T1D
Genome assembly (visualization)
32
hg19
28
GRCh38
Lab
32
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
files.file_type!
bed bedgraph
target.investigated_as!
histone
BIOSAMPLE
ASSAY
32 results
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Clear Filters
total RNA-seq
ATAC-seq
in vitro differentiated cells
pancreatic endoderm
4
definitive endodermal cell
2
embryonic stem cell
2
endocrine cell
2
posterior foregut
2
+ See 4 more…
tissue
islet of Langerhans
2
psoas muscle
2
aorta
1
heart left ventricle
1
heart right ventricle
1
+ See 2 more…
cell line
EndoC_BH1
2
2
early embryonic cell
2
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