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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
ChIP-seq
Assay category
19
DNA binding
Target of assay
27
transcription factor
23
control
19
histone
19
histone modification
11
narrow histone mark
8
broad histone mark
1
RNA binding protein
Date released
15
August, 2017
2
November, 2017
2
October, 2019
Available data
868
bigWig
bed narrowPeak
784
bam
391
bigBed narrowPeak
321
tagAlign
229
fastq
65
bed broadPeak
30
bigBed broadPeak
25
bed bed3+
1
tagAlign bed3+
Organism
19
Homo sapiens
Biosample type
14
primary cell
3
tissue
2
cell line
Organ
15
pancreas
2
blood vessel
2
epithelium
2
liver
2
vasculature
2
vein
Project
19
AMP
Genome assembly (visualization)
19
hg19
15
GRCh38
Lab
19
AMP-T2D consortium
Audit category:
15
missing controlled_by
Audit category:
2
inconsistent control read length
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
19 results
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Clear Filters
ChIP-seq
primary cell
pancreatic endocrine cell
12
endothelial cell of umbilical vein
2
tissue
islet of Langerhans
3
cell line
HepG2
2
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