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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
ChIP-seq
3
single cell RNA-seq
Assay category
17
DNA binding
3
Transcription
Target of assay
755
histone modification
754
histone
493
transcription factor
390
narrow histone mark
363
broad histone mark
105
RNA binding protein
88
recombinant protein
36
chromatin remodeller
20
control
5
other context
5
other post-translational modification
Date released
16
November, 2017
3
July, 2019
1
August, 2017
Available data
306
bam
168
fastq
68
tagAlign
20
bigWig
9
bed bed3+
3
tsv
Organism
20
Homo sapiens
Biosample type
13
cell line
7
primary cell
Organ
13
liver
6
brain
2
epithelium
2
vasculature
1
blood vessel
Project
20
AMP
Genome assembly (visualization)
20
hg19
3
GRCh38
Lab
20
AMP-T2D consortium
Kyle Gaulton, UCSD
files.file_type!
bedpe bed3+
tar
lab.title!
Kyle Gaulton, UCSD
BIOSAMPLE
ASSAY
20 results
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ChIP-seq
single cell RNA-seq
cell line
HepG2
13
primary cell
cerebellar granule cell
2
Purkinje cell
1
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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